Gene

cd248b

ID
ZDB-GENE-050309-46
Name
CD248 molecule, endosialin b
Symbol
cd248b Nomenclature History
Previous Names
  • im:7144089 (1)
  • si:ch211-123o7.5
  • TM-b (1)
Type
protein_coding_gene
Location
Chr: 21 Mapping Details/Browsers
Description
Predicted to have extracellular matrix binding activity and extracellular matrix protein binding activity. Predicted to be involved in cell migration. Predicted to localize to external side of plasma membrane. Is expressed in head mesenchyme and somite. Orthologous to human CD248 (CD248 molecule).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
11 figures from 3 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
7 figures from 2 publications
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With cd248b Human Ortholog
No data available
Associated With cd248b Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR013032 EGF-like, conserved site
Conserved_site IPR018097 EGF-like calcium-binding, conserved site
Domain IPR000742 EGF-like domain
Domain IPR001304 C-type lectin-like
Domain IPR001881 EGF-like calcium-binding domain
Domain IPR026823 Complement Clr-like EGF domain
Domain IPR049883 NOTCH1 EGF-like calcium-binding domain
Family IPR051505 C-type lectin domain-containing protein
Homologous_superfamily IPR009030 Growth factor receptor cysteine-rich domain superfamily
Homologous_superfamily IPR016186 C-type lectin-like/link domain superfamily
Homologous_superfamily IPR016187 C-type lectin fold
PTM IPR000152 EGF-type aspartate/asparagine hydroxylation site
Domain Details Per Protein
Protein Length Complement Clr-like EGF domain C-type lectin domain-containing protein C-type lectin fold C-type lectin-like C-type lectin-like/link domain superfamily EGF-like calcium-binding, conserved site EGF-like calcium-binding domain EGF-like, conserved site EGF-like domain EGF-type aspartate/asparagine hydroxylation site Growth factor receptor cysteine-rich domain superfamily NOTCH1 EGF-like calcium-binding domain
UniProtKB:E9QBZ7 668
Transcripts
Genome Browsers
Type Name Annotation Method Length (nt) Analysis
mRNA cd248b-201 (1) Havana 2007 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations