Gene

trpt1

ID
ZDB-GENE-050227-16
Name
tRNA phosphotransferase 1
Symbol
trpt1 Nomenclature History
Previous Names
  • zgc:113138
Type
protein_coding_gene
Location
Chr: 14 Mapping Details/Browsers
Description
Predicted to have tRNA 2'-phosphotransferase activity. Predicted to be involved in tRNA splicing, via endonucleolytic cleavage and ligation. Orthologous to human TRPT1 (tRNA phosphotransferase 1).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
1 figure from Thisse et al., 2004
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With trpt1 Human Ortholog
No data available
Associated With trpt1 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Family IPR002745 Phosphotransferase KptA/Tpt1
Homologous_superfamily IPR042080 RNA 2'-phosphotransferase, N-terminal domain
Homologous_superfamily IPR042081 RNA 2'-phosphotransferase, C-terminal domain
Domain Details Per Protein
Protein Length Phosphotransferase KptA/Tpt1 RNA 2'-phosphotransferase, C-terminal domain RNA 2'-phosphotransferase, N-terminal domain
UniProtKB:Q5EAR5 225
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA trpt1-201 (1) Ensembl 2,637 nt
mRNA trpt1-202 (1) Ensembl 915 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations