ZFIN is now using GRCz12tu for Genomic Data
Gene
chka
- ID
- ZDB-GENE-050208-149
- Name
- choline kinase alpha
- Symbol
- chka Nomenclature History
- Previous Names
-
- im:7143625
- si:dkey-12e7.3
- wu:fd46h01
- Type
- protein_coding_gene
- Location
- Chr: 18 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable choline kinase activity and ethanolamine kinase activity. Predicted to be involved in CDP-choline pathway and phosphatidylethanolamine biosynthetic process. Predicted to be active in cytoplasm. Is expressed in swim bladder. Orthologous to human CHKA (choline kinase alpha).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 3 figures from 3 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- IMAGE:7143625 (1 image)
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
| Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
|---|---|---|---|
| Neurodevelopmental disorder with microcephaly, movement abnormalities, and seizures | 620023 |
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Homologous_superfamily | IPR011009 | Protein kinase-like domain superfamily |
Domain Details Per Protein
| Protein | Additional Resources | Length | Protein kinase-like domain superfamily |
|---|---|---|---|
| UniProtKB:Q1LWF1 | InterPro | 418 | |
| UniProtKB:Q1LWF2 | InterPro | 400 | |
| UniProtKB:A0A8M3AKD3 | InterPro | 336 |
- Genome Browsers
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers