Gene

xgb

ID

ZDB-GENE-050125-1

Name

x globin

Symbol

xgb Nomenclature History

Previous Names

GbX1 (1)

Type

protein_coding_gene

Location

Chr: 17 Mapping Details/Browsers

Description

Enables heme binding activity; nitrite reductase activity; and oxygen binding activity. Acts upstream of or within response to hypoxia. Located in membrane. Is expressed in several structures, including blood; cardiovascular system; digestive system; kidney; and nervous system.

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

9 figures from 4 publications

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With xgb Human Ortholog

No data available

Associated With xgb Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR000971	Globin
Family	IPR050532	Globin-like Oxygen Transporters
Homologous_superfamily	IPR009050	Globin-like superfamily
Homologous_superfamily	IPR012292	Globin/Protoglobin

Domain Details Per Protein

Protein	Additional Resources	Length	Globin	Globin-like Oxygen Transporters	Globin-like superfamily	Globin/Protoglobin
UniProtKB:A3KNI8	InterPro	200

Transcripts

Genome Browsers

NCBI

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
mRNA	xgb-201 (1) Ensembl	Ensembl		1,087 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

Name	Type	Antigen Genes	Isotype	Host Organism	Assay	Source	Citations
Ab1-xgb	polyclonal	xgb		Rabbit	IHC		1

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations