Gene

zzef1

ID
ZDB-GENE-041222-2
Name
zinc finger, ZZ-type with EF hand domain 1
Symbol
zzef1 Nomenclature History
Previous Names
  • si:dkey-7b17.3
Type
protein_coding_gene
Location
Chr: 5 Mapping Details/Browsers
Description
Predicted to enable calcium ion binding activity and zinc ion binding activity. Predicted to be involved in anatomical structure morphogenesis. Orthologous to human ZZEF1 (zinc finger ZZ-type and EF-hand domain containing 1).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
No data available
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Allele Type Localization Consequence Mutagen Supplier
sa428Allele with one point mutationUnknownSplice SiteENU
Zebrafish International Resource Center (ZIRC) (order this)
sa2251Allele with one point mutationUnknownPremature StopENU
sa5742Allele with one point mutationUnknownPremature StopENU
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Sequence Targeting Reagents
No data available
Human Disease
Associated With zzef1 Human Ortholog
No data available
Associated With zzef1 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR000433 Zinc finger, ZZ-type
Domain IPR002048 EF-hand domain
Domain IPR004939 APC10/DOC domain
Domain IPR041986 ZZEF1, zinc finger, ZZ-type
Family IPR040099 Zinc finger ZZ-type and EF-hand domain-containing protein 1
1 - 5 of 9 Show all
Domain Details Per Protein
Protein Additional Resources Length APC10/DOC domain EF-hand domain EF-hand domain pair Galactose-binding-like domain superfamily Spermadhesin, CUB domain superfamily Zinc finger, ZZ-type Zinc finger ZZ-type and EF-hand domain-containing protein 1 Zinc finger, ZZ-type superfamily ZZEF1, zinc finger, ZZ-type
UniProtKB:A0A8M9P8V5 InterPro 3038
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Transcripts
Genome Browsers
Genome Build: GRCz11Chromosome: 5
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA zzef1-201 (1)
Ensembl
Ensembl 11,266 nt
ZFIN BLAST
mRNA zzef1-202 (1)
Ensembl
Ensembl 9,117 nt
ZFIN BLAST
mRNA zzef1-203 (1)
Ensembl
Ensembl 539 nt
ZFIN BLAST
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Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
No data available
Marker Relationships
Relationship Marker Type Marker Accession Numbers Citations
Contained inBACDKEY-193H7ZFIN Curated Data
Contained inBACDKEY-218N7ZFIN Curated Data
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Sequences
Type Accession # Sequence Length (nt/aa) Analysis
RNARefSeq:XM_021471612 (1)11301 nt
ZFIN BLASTNCBI BLASTEnsemblUCSC BLAT
GenomicGenBank:CR753844 (1)172761 nt
MegaBLASTEnsembl
PolypeptideUniProtKB:A0A8M9P8V5 (1)3038 aa
ZFIN BLASTSIB BLASTEnsembl Protein Blast
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Species Symbol Chromosome Accession # Evidence
HumanZZEF117
Amino acid sequence comparison (1)
Conserved genome location (synteny) (1)
MouseZzef111
Amino acid sequence comparison (1)
Conserved genome location (synteny) (1)
Citations
TSV
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