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ZIRC
ZFIN ID: ZDB-GENE-041212-5
Gene Name: solute carrier family 7 member 2
Gene Symbol: slc7a2    Nomenclature History

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Previous Name: zgc:103686

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 14 Mapping Details/Browsers
Description: Predicted to have L-lysine transmembrane transporter activity; L-ornithine transmembrane transporter activity; and arginine transmembrane transporter activity. Predicted to be involved in L-arginine import across plasma membrane and L-ornithine transmembrane transport. Predicted to localize to the integral component of membrane and plasma membrane. Orthologous to human SLC7A2 (solute carrier family 7 member 2).
Genome Resources: Alliance (1),  Gene:494041 (1),  Ensembl(GRCz11):ENSDARG00000037097 (1)
GENE EXPRESSION
Directly Submitted Expression Data: 7 figures (13 images) from Thisse et al., 2004 [MGC:103686]
Wild-type Stages, Structures: Segmentation:20-25 somites (19.0h-22.0h) to Larval:Day 5 (120.0h-144.0h, 3.9mm, 6 teeth)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa15902 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa22500 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • y314Et Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH slc7a2 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH slc7a2 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process amino acid transport (more)
    Cellular Component integral component of membrane (more)
    Molecular Function transmembrane transporter activity (more)
    GO Terms (all 10)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR002293 (1)
  • InterPro:IPR004755 (1)
  • InterPro:IPR029485 (1)
  • Pfam:PF13520 (1)
  • Pfam:PF13906 (1)
  • TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA slc7a2-201 (1)    Ensembl 3627
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM slc7a2 No data available
    MARKER RELATIONSHIPS
    slc7a2 Contained in: [BAC] CH211-186K13 (1) (order this)
    slc7a2 Encodes: [cDNA] MGC:103686 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001008584 (1) 3140 bp
    Genomic GenBank:CR384105 (1) 144285 bp
    Select Tool
    Polypeptide UniProtKB:A0A286Y7Z6 (1) 641 aa
    Sequence Clusters UniGene:160184 (1)
    Sequence Information (all 13)
    ORTHOLOGY for slc7a2 ( Chr: 14 )
    CITATIONS (21)