ZFIN is now using GRCz12tu for Genomic Data
Gene

si:ch211-238e22.2

ID
ZDB-GENE-041210-346
Name
si:ch211-238e22.2
Symbol
si:ch211-238e22.2 Nomenclature History
Previous Names
  • fc47g05
  • si:ch211-238e22.4
  • wu:fc47g05
Type
protein_coding_gene
Location
Chr: 4 Mapping Details/Browsers
Genome Assembly
GRCz12tu
Annotation Status
Current
Description
No data available
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
No data available
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With si:ch211-238e22.2 Human Ortholog
No data available
Associated With si:ch211-238e22.2 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR001810 F-box domain
Domain IPR003034 SAP domain
Domain IPR013087 Zinc finger C2H2-type
Domain IPR040648 HMG domain-containing protein 3, CxC4 like cysteine cluster
Domain IPR041300 CxC7-like cysteine cluster associated with KDZ transposases
Family IPR039598 HMG domain-containing protein 3
Homologous_superfamily IPR036047 F-box-like domain superfamily
Homologous_superfamily IPR038765 Papain-like cysteine peptidase superfamily
Domain Details Per Protein
Protein Additional Resources Length CxC7-like cysteine cluster associated with KDZ transposases F-box domain F-box-like domain superfamily HMG domain-containing protein 3 HMG domain-containing protein 3, CxC4 like cysteine cluster Papain-like cysteine peptidase superfamily SAP domain Zinc finger C2H2-type
UniProtKB:A0A8M6Z070 InterPro 236
UniProtKB:Q5RGK6 InterPro 153
UniProtKB:A0A8M2BJH5 InterPro 247
UniProtKB:A0AB32TMI1 InterPro 1208
UniProtKB:A0AB32TNZ9 InterPro 1196
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA si:ch211-238e22.2-201 (1)
Ensembl
Ensembl 521 nt
ZFIN BLAST
mRNA si:ch211-238e22.4-201 (1)
Ensembl
Ensembl 578 nt
ZFIN BLAST
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Genome Browsers
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations
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