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General Information
ZIRC
ZFIN ID: ZDB-GENE-041210-198
Gene Name: nuclear receptor subfamily 2, group C, member 1
Gene Symbol: nr2c1
Sequence Ontology ID : SO:0000704

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Previous Names: TR2 (1), si:dkey-183c16.2, zgc:110672

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(Including Attributions)
Location: Chr: 4 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have DNA-binding transcription factor activity and RNA polymerase II regulatory region sequence-specific DNA binding activity. Predicted to be involved in anatomical structure  ...
GENE EXPRESSION
Directly Submitted Expression Data: 6 figures (6 images) from Thisse et al., 2008 [dq017631]
Wild-type Stages, Structures: Gastrula:50%-epiboly (5.25h-5.66h) to Hatching:Long-pec (48.0h-60.0h)
 
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la024533Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH nr2c1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH nr2c1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process regulation of transcription, DNA-templated (more)
    Cellular Component nucleus (more)
    Molecular Function DNA binding (more)
    GO Terms (all 13)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA nr2c1-201 (1) 2336
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM nr2c1 No data available
    MARKER RELATIONSHIPS
    nr2c1Contained in: [BAC] DKEY-183C16 (1) (order this)
    nr2c1Encodes: [EST] dq017631 (1) (order this)
    [cDNA] MGC:110672 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001020622 (1) 2397bp
    Genomic GenBank:BX640593 (1) 218192bp Blast at MegaBLAST
    Polypeptide UniProtKB:Q503E0 (1) 600aa
    Sequence Clusters UniGene:42016 (1)
    Sequence Information (all 19)
    ORTHOLOGY for nr2c1 (Chr: 4)
    CITATIONS (26)