ZFIN ID: ZDB-GENE-041114-82
Gene Name: small nuclear ribonucleoprotein polypeptide A'
Gene Symbol: snrpa1
Sequence Ontology ID : SO:0000704

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Names: im:7142962, zgc:101832 (1)

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Location: Chr: 7 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have U2 snRNA binding activity; predicted to be involved in mRNA splicing, via spliceosome; predicted to localize to the U2 snRNP; orthologous to human SNRPA1 (small nuclear  ...
GENE EXPRESSION
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:7142962]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Hatching:Pec-fin (60.0h-72.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Targeting reagents:
PHENOTYPE No data available
DISEASE ASSOCIATED WITH snrpa1 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH snrpa1 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process mRNA splicing, via spliceosome (more)
Cellular Component U2 snRNP (more)
Molecular Function U2 snRNA binding (more)
GO Terms (all 3)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR001611 (1)
  • InterPro:IPR003603 (1)
  • InterPro:IPR032675 (1)
  • PROSITE:PS51450 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    ncRNA snrpa1-003 (1) 732
    snrpa1-004 (1) 822
    aberrant processed transcript snrpa1-201 (1) 1001
    mRNA snrpa1-202 (1) 1115
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM snrpa1 No data available
    MARKER RELATIONSHIPS
    snrpa1Contained in: [BAC] CH73-44P7 (1) (order this)
    snrpa1Encodes: [EST] IMAGE:7142962 (1) (order this)
    [cDNA] MGC:101832 (1) (order this), MGC:192566 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001007383 (1) 1055bp
    Genomic GenBank:CU856378 (1) 89292bp
    Select Tool
    Polypeptide UniProtKB:F1R300 (1) 277aa
    Sequence Clusters UniGene:14067 (1)
    Sequence Information (all 19)
    OTHER snrpa1 GENE PAGES
  • Alliance (1)
  • Gene:492511 (1)
  • VEGA:OTTDARG00000035378 (1)
  • Ensembl(GRCz11):ENSDARG00000024651 (2)
  • ORTHOLOGY for snrpa1 (Chr: 7)
    CITATIONS (18)