Gene
veph1
- ID
- ZDB-GENE-041014-375
- Name
- ventricular zone expressed PH domain-containing 1
- Symbol
- veph1 Nomenclature History
- Previous Names
-
- veph
- Type
- protein_coding_gene
- Location
- Chr: 18 Mapping Details/Browsers
- Description
- Predicted to enable phosphatidylinositol-5-phosphate binding activity. Acts upstream of or within brain development and ear morphogenesis. Predicted to be located in membrane. Predicted to be active in plasma membrane. Is expressed in brain; hindbrain; midbrain; otic vesicle; and ventricular zone. Orthologous to human VEPH1 (ventricular zone expressed PH domain containing 1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 7 figures from 2 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- eu1048 (8 images)
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
No data available
Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
Protein | Additional Resources | Length | Armadillo-type fold | PH-like domain superfamily | Pleckstrin homology domain | Protein melted-like |
---|---|---|---|---|---|---|
UniProtKB:A2BID5 | InterPro | 813 | ||||
UniProtKB:A0A0R4I9B9 | InterPro | 813 |
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Interactions and Pathways
No data available
Plasmids
No data available
No data available
Relationship | Marker Type | Marker | Accession Numbers | Citations |
---|---|---|---|---|
Contained in | BAC | CH73-284D16 | ZFIN Curated Data | |
Contained in | BAC | CH211-122B16 | ZFIN Curated Data | |
Contained in | BAC | CH211-232P17 | ZFIN Curated Data | |
Contained in | BAC | CH211-272F3 | ZFIN Curated Data | |
Contained in | BAC | CH211-283J23 | ZFIN Curated Data | |
Encodes | EST | eu1048 | Thisse et al., 2005 | |
Encodes | cDNA | MGC:162103 | ZFIN Curated Data |
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Type | Accession # | Sequence | Length (nt/aa) | Analysis |
---|---|---|---|---|
RNA | RefSeq:NM_212831 (1) | 2644 nt | ||
Genomic | GenBank:BX255879 (1) | 173755 nt | ||
Polypeptide | UniProtKB:A0A0R4I9B9 (1) | 813 aa |
- Muto, E., Tabata, Y., Taneda, T., Aoki, Y., Muto, A., Arai, K., and Watanabe, S. (2004) Identification and characterization of Veph, a novel gene encoding a PH domain-containing protein expressed in the developing central nervous system of vertebrates. Biochimie. 86(8):523-531
- Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J., and Marra,M.A. (2002) Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Proceedings of the National Academy of Sciences of the United States of America. 99(26):16899-903
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