Gene
zc3h14
- ID
- ZDB-GENE-041014-257
- Name
- zinc finger CCCH-type containing 14
- Symbol
- zc3h14 Nomenclature History
- Previous Names
-
- si:dkey-199i12.4
- zgc:136266
- Type
- protein_coding_gene
- Location
- Chr: 20 Mapping Details/Browsers
- Description
- Predicted to enable poly(A) binding activity. Predicted to be involved in regulation of mRNA stability. Predicted to be located in nuclear speck. Predicted to be active in cytoplasm and nucleus. Human ortholog(s) of this gene implicated in autosomal recessive intellectual developmental disorder 56. Orthologous to human ZC3H14 (zinc finger CCCH-type containing 14).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 1 figure from Thisse et al., 2004
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- IMAGE:7151681 (1 image)
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
No data available
Human Disease
| Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
|---|---|---|---|
| autosomal recessive intellectual developmental disorder 56 | Alliance | Intellectual developmental disorder, autosomal recessive 56 | 617125 |
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Family | IPR040366 | Nuclear polyadenylated RNA-binding protein Nab2/ZC3H14 |
Domain Details Per Protein
| Protein | Additional Resources | Length | Nuclear polyadenylated RNA-binding protein Nab2/ZC3H14 |
|---|---|---|---|
| UniProtKB:Q5TYQ8 | InterPro | 669 |
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
zc3h14-201
(1)
|
Ensembl | 2,332 nt | ||
| mRNA |
zc3h14-203
(1)
|
Ensembl | 700 nt | ||
| ncRNA |
zc3h14-002
(1)
|
Ensembl | 521 nt | ||
| ncRNA |
zc3h14-003
(1)
|
Ensembl | 318 nt | ||
| ncRNA |
zc3h14-005
(1)
|
Ensembl | 642 nt | ||
| ncRNA |
zc3h14-006
(1)
|
Ensembl | 892 nt |
Interactions and Pathways
No data available
Plasmids
No data available
No data available
| Relationship | Marker Type | Marker | Accession Numbers | Citations |
|---|---|---|---|---|
| Contained in | BAC | DKEY-199I12 | ZFIN Curated Data | |
| Encodes | EST | IMAGE:7151681 | Thisse et al., 2004 | |
| Encodes | cDNA | MGC:136266 | ZFIN Curated Data |
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| Type | Accession # | Sequence | Length (nt/aa) | Analysis |
|---|---|---|---|---|
| RNA | RefSeq:NM_001025524 (1) | 2349 nt | ||
| Genomic | GenBank:CR855367 (1) | 205562 nt | ||
| Polypeptide | UniProtKB:Q5TYQ8 (1) | 669 aa |
| Species | Symbol | Chromosome | Accession # | Evidence |
|---|---|---|---|---|
| Human | ZC3H14 | 14 | Amino acid sequence comparison (1) |
- Steinke, D., Salzburger, W., Braasch, I., and Meyer, A. (2006) Many genes in fish have species-specific asymmetric rates of molecular evolution. BMC Genomics. 7(1):20
- Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J., and Marra,M.A. (2002) Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Proceedings of the National Academy of Sciences of the United States of America. 99(26):16899-903
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