ZFIN is now using GRCz12tu for Genomic Data
Gene
ccl38.6
- ID
- ZDB-GENE-041014-165
- Name
- chemokine (C-C motif) ligand 38, duplicate 6
- Symbol
- ccl38.6 Nomenclature History
- Previous Names
- Type
- protein_coding_gene
- Location
- Chr: 20 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Human ortholog(s) of this gene implicated in several diseases, including IgA vasculitis; aggressive periodontitis; gastrointestinal system cancer (multiple); lung disease (multiple); and vasculitis (multiple). Orthologous to several human genes including CCL2 (C-C motif chemokine ligand 2).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | CC chemokine, conserved site | Chemokine beta/gamma/delta | Chemokine interleukin-8-like domain | Chemokine interleukin-8-like superfamily |
|---|---|---|---|---|---|---|
| UniProtKB:F8W4J0 | InterPro | |||||
| UniProtKB:Q5TYP6 | InterPro | 103 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
ccl38.6-201
(1)
|
Ensembl | 501 nt | ||
| mRNA |
ccl38.6-202
(1)
|
Ensembl | 616 nt | ||
| mRNA |
ccl38.6-203
(1)
|
Ensembl | 1,036 nt | ||
| mRNA |
ccl38.6-204
(1)
|
Ensembl | 849 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers