Gene
si:dkey-93h22.8
- ID
- ZDB-GENE-041008-203
- Name
- si:dkey-93h22.8
- Symbol
- si:dkey-93h22.8 Nomenclature History
- Previous Names
-
- fc32h05
- fi41c08
- im:7140483 (1)
- wu:fc32h05
- wu:fi41c08
- Type
- protein_coding_gene
- Location
- Chr: 11 Mapping Details/Browsers
- Description
- Predicted to enable transcription coactivator activity. Predicted to be involved in energy homeostasis and positive regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. Orthologous to human PPRC1 (PPARG related coactivator 1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 1 figure from Thisse et al., 2004
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- IMAGE:7140483 (1 image)
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
No data available
No data available
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR000504 | RNA recognition motif domain |
| Domain | IPR034834 | PGC-1-related coactivator, RNA recognition motif |
| Family | IPR034605 | PGC-1 |
| Homologous_superfamily | IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily |
| Homologous_superfamily | IPR035979 | RNA-binding domain superfamily |
1 - 5 of 5
Domain Details Per Protein
| Protein | Additional Resources | Length | Nucleotide-binding alpha-beta plait domain superfamily | PGC-1 | PGC-1-related coactivator, RNA recognition motif | RNA-binding domain superfamily | RNA recognition motif domain |
|---|---|---|---|---|---|---|---|
| UniProtKB:A0A8M1P1P0 | InterPro | 958 | |||||
| UniProtKB:A0A8M9QHM3 | InterPro | 932 |
1 - 2 of 2
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
si:dkey-93h22.8-201
(1)
|
Ensembl | 4,030 nt |
1 - 1 of 1
Interactions and Pathways
No data available
Plasmids
No data available
No data available
| Relationship | Marker Type | Marker | Accession Numbers | Citations |
|---|---|---|---|---|
| Contained in | BAC | DKEY-93H22 | ZFIN Curated Data | |
| Encodes | EST | fc32h05 | ||
| Encodes | EST | fi41c08 | ||
| Encodes | EST | IMAGE:7140483 | Thisse et al., 2004 |
1 - 4 of 4
Show
| Type | Accession # | Sequence | Length (nt/aa) | Analysis |
|---|---|---|---|---|
| RNA | RefSeq:NM_001309792 (1) | 4006 nt | ||
| Genomic | GenBank:CR293511 (1) | 178953 nt | ||
| Polypeptide | UniProtKB:A0A8M1P1P0 (1) | 958 aa |
No data available
No data available