Gene

nitr9

ID

ZDB-GENE-041001-6

Name

novel immune-type receptor 9

Symbol

nitr9 Nomenclature History

Previous Names

nitr9.1 (1)
zgc:123078

Type

protein_coding_gene

Location

Chr: 7 Mapping Details/Browsers

Description

Involved in phosphatidylinositol 3-kinase signaling and response to bacterium. Predicted to localize to integral component of membrane. Is expressed in digestive system; gill; immune system; and myeloid cell.

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

7 figures from 4 publications

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

cssl:d0615 (1 image)
cssl:d0616 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With nitr9 Human Ortholog

No data available

Associated With nitr9 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR003599	Immunoglobulin domain subtype
Domain	IPR007110	Immunoglobulin-like domain
Family	IPR052051	T cell receptor complex component
Homologous_superfamily	IPR013783	Immunoglobulin-like fold
Homologous_superfamily	IPR036179	Immunoglobulin-like domain superfamily

Domain Details Per Protein

Protein	Length	Immunoglobulin domain subtype	Immunoglobulin-like domain	Immunoglobulin-like domain superfamily	Immunoglobulin-like fold	T cell receptor complex component
UniProtKB:Q5YCY6 InterPro	285

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	nitr9-201 (1) Ensembl	Ensembl	1,465 nt	Select Tool
mRNA	nitr9-202 (1) Ensembl	Ensembl	606 nt	Select Tool ZFIN BLAST
mRNA	nitr9-203 (1) Ensembl	Ensembl	951 nt	Select Tool ZFIN BLAST
mRNA	nitr9-204 (1) Ensembl	Ensembl	858 nt	Select Tool ZFIN BLAST
ncRNA	nitr9-004 (1) Ensembl	Ensembl	577 nt	Select Tool
ncRNA	ottdart00000061460 (1) Ensembl	Ensembl	375 nt	Select Tool

Interactions and Pathways

No data available

Antibodies

Name	Type	Antigen Genes	Isotype	Host Organism	Assay	Source	Citations
Ab2-nitr9	monoclonal	nitr9	IgG2a , k	Mouse			1
Ab1-nitr9	monoclonal	nitr9	IgG2b , k	Mouse	WB		2

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations