Gene

rfc5

ID
ZDB-GENE-040907-1
Name
replication factor C (activator 1) 5
Symbol
rfc5 Nomenclature History
Previous Names
  • zgc:110313
Type
protein_coding_gene
Location
Chr: 5 Mapping Details/Browsers
Description
Predicted to contribute to DNA clamp loader activity. Involved in retina development in camera-type eye. Predicted to localize to DNA replication factor C complex and nucleus. Orthologous to human RFC5 (replication factor C subunit 5).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
No data available
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
No data available
Wild Type Expression Summary
Phenotype
All Phenotype Data
2 figures from 2 publications
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With rfc5 Human Ortholog
No data available
Associated With rfc5 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR003593 AAA+ ATPase domain
Domain IPR003959 ATPase, AAA-type, core
Domain IPR013748 Replication factor C, C-terminal
Domain IPR047854 Replication factor C, lid domain
Family IPR050238 DNA Replication and Repair Clamp Loader Complex
Homologous_superfamily IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal
Homologous_superfamily IPR027417 P-loop containing nucleoside triphosphate hydrolase
Domain Details Per Protein
Protein Length AAA+ ATPase domain ATPase, AAA-type, core DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal DNA Replication and Repair Clamp Loader Complex P-loop containing nucleoside triphosphate hydrolase Replication factor C, C-terminal Replication factor C, lid domain
UniProtKB:Q6DRK4 334
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA rfc5-201 (1) Ensembl 1,564 nt
ncRNA rfc5-002 (1) Ensembl 672 nt
ncRNA rfc5-003 (1) Ensembl 616 nt
ncRNA rfc5-004 (1) Ensembl 818 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations