Gene

rnf113a

ID
ZDB-GENE-040825-1
Name
ring finger protein 113A
Symbol
rnf113a Nomenclature History
Previous Names
  • znf183 (1)
  • wu:fj91a07
  • zgc:110007
Type
protein_coding_gene
Location
Chr: 3 Mapping Details/Browsers
Description
Predicted to have metal ion binding activity. Predicted to be involved in snoRNA splicing. Predicted to localize to U2-type spliceosomal complex. Human ortholog(s) of this gene implicated in nonphotosensitive trichothiodystrophy 5. Orthologous to several human genes including RNF113A (ring finger protein 113A).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
1 figure from Thisse et al., 2004
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
2 figures from 2 publications
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With rnf113a Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
nonphotosensitive trichothiodystrophy 5 Alliance Trichothiodystrophy 5, nonphotosensitive 300953
Associated With rnf113a Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR017907 Zinc finger, RING-type, conserved site
Domain IPR000571 Zinc finger, CCCH-type
Domain IPR001841 Zinc finger, RING-type
Family IPR039971 Pre-mRNA-splicing factor CWC24-like
Homologous_superfamily IPR013083 Zinc finger, RING/FYVE/PHD-type
Homologous_superfamily IPR036855 Zinc finger, CCCH-type superfamily
Domain Details Per Protein
Protein Length Pre-mRNA-splicing factor CWC24-like Zinc finger, CCCH-type Zinc finger, CCCH-type superfamily Zinc finger, RING/FYVE/PHD-type Zinc finger, RING-type Zinc finger, RING-type, conserved site
UniProtKB:Q6DRF0 321
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA rnf113a-201 (1) Ensembl 1,117 nt
ncRNA rnf113a-002 (1) Ensembl 836 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations