Gene
cthrc1a
- ID
- ZDB-GENE-040808-22
- Name
- collagen triple helix repeat containing 1a
- Symbol
- cthrc1a Nomenclature History
- Previous Names
-
- zgc:101075
- Type
- protein_coding_gene
- Location
- Chr: 19 Mapping Details/Browsers
- Description
- Predicted to localize to collagen trimer. Human ortholog(s) of this gene implicated in Barrett's esophagus. Is expressed in several structures, including axis; margin; musculature system; shield; and yolk syncytial layer. Orthologous to human CTHRC1 (collagen triple helix repeat containing 1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 12 figures from 5 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- IMAGE:7153214 (20 images)
Wild Type Expression Summary
Phenotype Summary
Mutations
Human Disease
| Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
|---|---|---|---|
| Barrett's esophagus | Alliance | Barrett esophagus/esophageal adenocarcinoma | 614266 |
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Repeat | IPR008160 | Collagen triple helix repeat |
Domain Details Per Protein
| Protein | Length | Collagen triple helix repeat |
|---|---|---|
|
UniProtKB:Q6AXL0
|
231 |
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
cthrc1a-201
(1)
|
Ensembl | 1,262 nt |
Interactions and Pathways
No data available
Plasmids
No data available