Gene
polr2eb
- ID
- ZDB-GENE-040801-83
- Name
- RNA polymerase II, I and III subunit E, b
- Symbol
- polr2eb Nomenclature History
- Previous Names
-
- polr2e
- fk97g10
- wu:fk97g10
- zgc:101098
- Type
- protein_coding_gene
- Location
- Chr: 22 Mapping Details/Browsers
- Description
- Predicted to enable DNA binding activity. Predicted to contribute to DNA-directed RNA polymerase activity. Predicted to be involved in tRNA transcription by RNA polymerase III; transcription by RNA polymerase II; and transcription elongation by RNA polymerase I. Predicted to act upstream of or within DNA-templated transcription. Predicted to be located in nucleoplasm. Predicted to be part of RNA polymerase I complex; RNA polymerase II, core complex; and RNA polymerase III complex. Orthologous to human POLR2E (RNA polymerase II, I and III subunit E).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 1 figure from Thisse et al., 2004
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- IMAGE:7155223 (1 image)
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Conserved_site | IPR020608 | RNA polymerase, subunit H/Rpb5, conserved site |
| Domain | IPR000783 | RNA polymerase, subunit H/Rpb5 C-terminal |
| Domain | IPR005571 | RNA polymerase, Rpb5, N-terminal |
| Family | IPR014381 | DNA-directed RNA polymerase subunit Rpo5/Rpb5 |
| Homologous_superfamily | IPR035913 | RPB5-like RNA polymerase subunit superfamily |
| Homologous_superfamily | IPR036710 | RNA polymerase Rpb5, N-terminal domain superfamily |
Domain Details Per Protein
| Protein | Additional Resources | Length | DNA-directed RNA polymerase subunit Rpo5/Rpb5 | RNA polymerase, Rpb5, N-terminal | RNA polymerase Rpb5, N-terminal domain superfamily | RNA polymerase, subunit H/Rpb5, conserved site | RNA polymerase, subunit H/Rpb5 C-terminal | RPB5-like RNA polymerase subunit superfamily |
|---|---|---|---|---|---|---|---|---|
| UniProtKB:Q6DEG5 | InterPro | 210 |
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
polr2eb-201
(1)
|
Ensembl | 827 nt | ||
| ncRNA |
polr2eb-002
(1)
|
Ensembl | 552 nt | ||
| ncRNA |
polr2eb-003
(1)
|
Ensembl | 624 nt |
Interactions and Pathways
No data available
Plasmids
No data available