Gene

sh3bgr

ID

ZDB-GENE-040801-27

Name

SH3 domain binding glutamate-rich protein

Symbol

sh3bgr Nomenclature History

Previous Names

zgc:100896

Type

protein_coding_gene

Location

Chr: 15 Mapping Details/Browsers

Description

Is expressed in several structures, including intestine; nervous system; otic vesicle; pectoral fin; and somite border. Orthologous to human SH3BGR (SH3 domain binding glutamate rich protein).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

2 figures from Tong et al., 2016

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With sh3bgr Human Ortholog

No data available

Associated With sh3bgr Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Family	IPR006993	SH3-binding, glutamic acid-rich protein
Family	IPR051033	SH3 domain-binding glutamic acid-rich protein
Homologous_superfamily	IPR036249	Thioredoxin-like superfamily

Domain Details Per Protein

Protein	Length	SH3-binding, glutamic acid-rich protein	SH3 domain-binding glutamic acid-rich protein	Thioredoxin-like superfamily
UniProtKB:Q6DEH8 InterPro	182
UniProtKB:A0A8M2BH34 InterPro	130
UniProtKB:A0A8M9QLC6 InterPro	213
UniProtKB:A0A8M2BGX9 InterPro	196
UniProtKB:A0A8M3B0Q6 InterPro	214
UniProtKB:A0A8M2BH31 InterPro	230
UniProtKB:A0A8M3APJ1 InterPro	222
UniProtKB:A0A8M2BH04 InterPro	122
UniProtKB:A0A8M2BH02 InterPro	204
UniProtKB:A0A8M2BGZ0 InterPro	156
UniProtKB:A0A8M3AH20 InterPro	222
UniProtKB:A0A8M2BHI0 InterPro	204
UniProtKB:A0A8M9Q0A5 InterPro	174
UniProtKB:A0A8M9QPT8 InterPro	148
UniProtKB:A0A8M9QBY3 InterPro	166
UniProtKB:A0A8M9QH70 InterPro	165
UniProtKB:A0A8M3AI92 InterPro	148

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	sh3bgr-201 (1) Ensembl	Ensembl	546 nt	Select Tool ZFIN BLAST
mRNA	sh3bgr-202 (1) Ensembl	Ensembl	607 nt	Select Tool
mRNA	sh3bgr-203 (1) Ensembl	Ensembl	698 nt	Select Tool

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

Addgene:192727

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations