Gene
srsf5b
- ID
- ZDB-GENE-040718-354
- Name
- serine and arginine rich splicing factor 5b
- Symbol
- srsf5b Nomenclature History
- Previous Names
- Type
- protein_coding_gene
- Location
- Chr: 20 Mapping Details/Browsers
- Description
- Predicted to enable RNA binding activity. Predicted to be involved in mRNA splicing, via spliceosome. Predicted to be active in nuclear speck. Orthologous to human SRSF5 (serine and arginine rich splicing factor 5).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 3 figures from 2 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
Wild Type Expression Summary
- All Phenotype Data
- 1 Figure from Joris et al., 2017
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | Nucleotide-binding alpha-beta plait domain superfamily | RNA-binding domain superfamily | RNA recognition motif domain | RRT5/SRSF/Splicing Factor SR |
|---|---|---|---|---|---|---|
| UniProtKB:Q6DHJ0 | InterPro | 285 | ||||
| UniProtKB:A0A8M3AT78 | InterPro | 177 | ||||
| UniProtKB:Q4V988 | InterPro | 164 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
srsf5b-202
(1)
|
Ensembl | 1,707 nt | ||
| mRNA |
srsf5b-203
(1)
|
Ensembl | 835 nt | ||
| mRNA |
srsf5b-204
(1)
|
Ensembl | 2,640 nt | ||
| mRNA |
srsf5b-205
(1)
|
Ensembl | 715 nt | ||
| ncRNA |
srsf5b-005
(1)
|
Ensembl | 559 nt |
Interactions and Pathways
No data available
Plasmids
No data available