ZFIN is now using GRCz12tu for Genomic Data
Gene
sntb1
- ID
- ZDB-GENE-040704-13
- Name
- syntrophin, basic 1
- Symbol
- sntb1 Nomenclature History
- Previous Names
-
- zgc:92432
- Type
- protein_coding_gene
- Location
- Chr: 16 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable structural molecule activity. Predicted to be located in cytoplasm and cytoskeleton. Predicted to be part of dystrophin-associated glycoprotein complex. Predicted to be active in synapse. Is expressed in epidermis; forebrain; otic vesicle; and pronephric duct. Orthologous to human SNTB1 (syntrophin beta 1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 6 figures from Thisse et al., 2004
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- MGC:92432 (10 images)
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR001478 | PDZ domain |
| Domain | IPR001849 | Pleckstrin homology domain |
| Domain | IPR041428 | Syntrophin, split Pleckstrin homology (PH) domain |
| Domain | IPR055108 | Syntrophin, C-terminal PH domain |
| Family | IPR015482 | Syntrophin |
| Homologous_superfamily | IPR011993 | PH-like domain superfamily |
| Homologous_superfamily | IPR036034 | PDZ superfamily |
Domain Details Per Protein
| Protein | Additional Resources | Length | PDZ domain | PDZ superfamily | PH-like domain superfamily | Pleckstrin homology domain | Syntrophin | Syntrophin, C-terminal PH domain | Syntrophin, split Pleckstrin homology (PH) domain |
|---|---|---|---|---|---|---|---|---|---|
| UniProtKB:Q6GMG2 | InterPro | 515 |
- Genome Browsers
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers