ZFIN ID: ZDB-GENE-040625-115
Gene Name: EF-hand calcium binding domain 7
Gene Symbol: efcab7    Nomenclature History

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Previous Names: fc67a03, wu:fc67a03, zgc:86807

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 6 Mapping Details/Browsers
Description: Predicted to have calcium ion binding activity. Orthologous to human EFCAB7 (EF-hand calcium binding domain 7).
Genome Resources: Alliance (1),  Gene:415210 (1),  Ensembl(GRCz11):ENSDARG00000020279 (2)
GENE EXPRESSION
All Expression Data: Fig. 2 from Lam et al., 2011
Wild-type Stages, Structures: Adult (90d-730d, breeding adult) to Adult (90d-730d, breeding adult)
 
High Throughput Expression: GEO (1) Expression Atlas (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa20724 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa20725 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH efcab7 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH efcab7 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Cellular Component cellular_component (more)
    Molecular Function calcium ion binding (more)
    GO Terms (all 2)
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA efcab7-204 (1)    Ensembl 2377
    ncRNA efcab7-002 (1)    Ensembl 760
    efcab7-003 (1)    Ensembl 799
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM efcab7 No data available
    MARKER RELATIONSHIPS
    efcab7 Contained in: [BAC] DKEY-148H10 (1) (order this)
    efcab7 Encodes: [EST] fc67a03
    [cDNA] MGC:86807 (1)
    SEQUENCE INFORMATION
    Type Accession # Length (nt/aa) Analysis
    RNA RefSeq:NM_001002120 (1) 2362 nt
    Genomic GenBank:BX664614 (1) 184225 nt
    Select Tool
    Polypeptide UniProtKB:F1Q5Y8 (1) 606 aa
    Sequence Information (all 12)
    ORTHOLOGY for efcab7 ( Chr: 6 )
    CITATIONS (18)