ZFIN is now using GRCz12tu for Genomic Data
Gene
chmp4ba
- ID
- ZDB-GENE-040426-906
- Name
- charged multivesicular body protein 4Ba
- Symbol
- chmp4ba Nomenclature History
- Previous Names
-
- zgc:56112
- Type
- protein_coding_gene
- Location
- Chr: 6 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Involved in cilium assembly. Predicted to be located in cytosol; late endosome membrane; and midbody. Predicted to be part of ESCRT III complex. Predicted to be active in cytoplasmic side of plasma membrane; multivesicular body; and nuclear envelope. Human ortholog(s) of this gene implicated in cataract 31 multiple types. Orthologous to human CHMP4B (charged multivesicular body protein 4B).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
| Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
|---|---|---|---|
| cataract 31 multiple types | Alliance | Cataract 31, multiple types | 605387 |
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Family | IPR005024 | Snf7 family |
Domain Details Per Protein
| Protein | Additional Resources | Length | Snf7 family |
|---|---|---|---|
| UniProtKB:B2GR99 | InterPro | 220 | |
| UniProtKB:Q7ZVC4 | InterPro | 220 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| antisense |
ottdart00000048470
(1)
|
Ensembl | 807 nt | ||
| mRNA |
chmp4ba-201
(1)
|
Ensembl | 2,011 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers