Gene

pals2b

ID
ZDB-GENE-040426-775
Name
protein associated with LIN7 2, MAGUK p55 family member b
Symbol
pals2b Nomenclature History
Previous Names
  • mpp6
  • mpp6b
  • zgc:55662
Type
protein_coding_gene
Location
Chr: 19 Mapping Details/Browsers
Description
Is expressed in epiphysis and retina. Orthologous to human MPP6 (membrane palmitoylated protein 6).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
5 figures from Thisse et al., 2004
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
2 figures from Charlton-Perkins et al., 2019
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With pals2b Human Ortholog
No data available
Associated With pals2b Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR020590 Guanylate kinase, conserved site
Domain IPR001452 SH3 domain
Domain IPR001478 PDZ domain
Domain IPR004172 L27 domain
Domain IPR008144 Guanylate kinase-like domain
Domain IPR008145 Guanylate kinase/L-type calcium channel beta subunit
Domain IPR014775 L27 domain, C-terminal
Family IPR050716 Membrane-associated guanylate kinase
Homologous_superfamily IPR027417 P-loop containing nucleoside triphosphate hydrolase
Homologous_superfamily IPR036028 SH3-like domain superfamily
Homologous_superfamily IPR036034 PDZ superfamily
Homologous_superfamily IPR036892 L27 domain superfamily
Domain Details Per Protein
Protein Length Guanylate kinase, conserved site Guanylate kinase-like domain Guanylate kinase/L-type calcium channel beta subunit L27 domain L27 domain, C-terminal L27 domain superfamily Membrane-associated guanylate kinase PDZ domain PDZ superfamily P-loop containing nucleoside triphosphate hydrolase SH3 domain SH3-like domain superfamily
UniProtKB:A0A8M2BHB1 580
UniProtKB:A0A8M9PAV5 543
UniProtKB:Q1LW94 539
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA mpp6b-201 (1) Ensembl 2,095 nt
mRNA mpp6b-202 (1) Ensembl 1,835 nt
mRNA mpp6b-203 (1) Ensembl 497 nt
ncRNA mpp6b-003 (1) Ensembl 499 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations