ZFIN is now using GRCz12tu for Genomic Data
Gene
rnf13
- ID
- ZDB-GENE-040426-772
- Name
- ring finger protein 13
- Symbol
- rnf13 Nomenclature History
- Previous Names
-
- wu:fj82g10
- zgc:55660 (1)
- zgc:77194
- Type
- protein_coding_gene
- Location
- Chr: 22 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable ubiquitin protein ligase activity. Predicted to be involved in ubiquitin-dependent protein catabolic process. Predicted to be located in endomembrane system and membrane. Predicted to be active in cytoplasm. Human ortholog(s) of this gene implicated in developmental and epileptic encephalopathy 73. Orthologous to human RNF13 (ring finger protein 13).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 1 figure from Thisse et al., 2004
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- MGC:55660 (1 image)
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
| Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
|---|---|---|---|
| developmental and epileptic encephalopathy 73 | Alliance | Developmental and epileptic encephalopathy 73 | 618379 |
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR001841 | Zinc finger, RING-type |
| Domain | IPR003137 | PA domain |
| Domain | IPR044744 | ZNRF4 /RNF13/RNF167, PA domain |
| Family | IPR051653 | E3 ubiquitin-protein ligase and sorting receptor |
| Homologous_superfamily | IPR013083 | Zinc finger, RING/FYVE/PHD-type |
| Homologous_superfamily | IPR046450 | PA domain superfamily |
Domain Details Per Protein
| Protein | Additional Resources | Length | E3 ubiquitin-protein ligase and sorting receptor | PA domain | PA domain superfamily | Zinc finger, RING/FYVE/PHD-type | Zinc finger, RING-type | ZNRF4 /RNF13/RNF167, PA domain |
|---|---|---|---|---|---|---|---|---|
| UniProtKB:Q803J9 | InterPro | 377 | ||||||
| UniProtKB:A0AB32TEQ5 | InterPro | 377 |
- Genome Browsers
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers