ZFIN is now using GRCz12tu for Genomic Data
Gene
utp6
- ID
- ZDB-GENE-040426-769
- Name
- UTP6 small subunit processome component
- Symbol
- utp6 Nomenclature History
- Previous Names
-
- zgc:55648 (1)
- Type
- protein_coding_gene
- Location
- Chr: 6 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable snoRNA binding activity. Predicted to be involved in maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA). Predicted to act upstream of or within rRNA processing. Predicted to be located in nucleolus. Predicted to be part of Pwp2p-containing subcomplex of 90S preribosome and small-subunit processome. Orthologous to human UTP6 (UTP6 small subunit processome component).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 1 figure from Thisse et al., 2004
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- MGC:55648 (1 image)
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR055347 | U3 small nucleolar RNA-associated protein 6, N-terminal |
| Domain | IPR056907 | U3 small nucleolar RNA-associated protein 6 homolog, C-terminal |
| Family | IPR013949 | U3 small nucleolar RNA-associated protein 6 |
| Homologous_superfamily | IPR011990 | Tetratricopeptide-like helical domain superfamily |
| Repeat | IPR003107 | HAT (Half-A-TPR) repeat |
Domain Details Per Protein
| Protein | Additional Resources | Length | HAT (Half-A-TPR) repeat | Tetratricopeptide-like helical domain superfamily | U3 small nucleolar RNA-associated protein 6 | U3 small nucleolar RNA-associated protein 6 homolog, C-terminal | U3 small nucleolar RNA-associated protein 6, N-terminal |
|---|---|---|---|---|---|---|---|
| UniProtKB:A9JTC5 | InterPro | 594 | |||||
| UniProtKB:A0AC58JQP8 | InterPro | 375 | |||||
| UniProtKB:A0AC58JQR2 | InterPro | 377 |
- Genome Browsers
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers