Gene

utp6

ID
ZDB-GENE-040426-769
Name
UTP6 small subunit processome component
Symbol
utp6 Nomenclature History
Previous Names
  • zgc:55648 (1)
Type
protein_coding_gene
Location
Chr: 6 Mapping Details/Browsers
Description
Predicted to have snoRNA binding activity. Predicted to be involved in maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA). Predicted to localize to Pwp2p-containing subcomplex of 90S preribosome and small-subunit processome. Orthologous to human UTP6 (UTP6 small subunit processome component).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
1 figure from Thisse et al., 2004
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With utp6 Human Ortholog
No data available
Associated With utp6 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Family IPR013949 U3 small nucleolar RNA-associated protein 6
Homologous_superfamily IPR011990 Tetratricopeptide-like helical domain superfamily
Repeat IPR003107 HAT (Half-A-TPR) repeat
Domain Details Per Protein
Protein Length HAT (Half-A-TPR) repeat Tetratricopeptide-like helical domain superfamily U3 small nucleolar RNA-associated protein 6
UniProtKB:A9JTC5 594
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA utp6-201 (1) Ensembl 732 nt
mRNA utp6-204 (1) Ensembl 622 nt
mRNA utp6-205 (1) Ensembl 2,014 nt
ncRNA utp6-004 (1) Ensembl 433 nt
ncRNA utp6-005 (1) Ensembl 782 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations