Gene
crnkl1
- ID
- ZDB-GENE-040426-694
- Name
- crooked neck pre-mRNA splicing factor 1
- Symbol
- crnkl1 Nomenclature History
- Previous Names
-
- zgc:55327 (1)
- Type
- protein_coding_gene
- Location
- Chr: 20 Mapping Details/Browsers
- Description
- Predicted to be involved in spliceosomal complex assembly. Predicted to act upstream of or within RNA splicing and mRNA processing. Predicted to be located in nuclear speck. Predicted to be part of Prp19 complex; U2-type catalytic step 2 spliceosome; and post-mRNA release spliceosomal complex. Human ortholog(s) of this gene implicated in basal cell carcinoma. Orthologous to human CRNKL1 (crooked neck pre-mRNA splicing factor 1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- No data available
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | HAT (Half-A-TPR) repeat | Pre-mRNA-splicing factor Syf1/CRNKL1-like, C-terminal HAT-repeats domain | Pre-mRNA-splicing factor Syf1-like | Tetratricopeptide-like helical domain superfamily |
|---|---|---|---|---|---|---|
| UniProtKB:Q803R7 | InterPro | 753 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
crnkl1-201
(1)
|
Ensembl | 2,371 nt |
Interactions and Pathways
No data available
Plasmids
No data available