Gene
ddx39ab
- ID
- ZDB-GENE-040426-2902
- Name
- DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Ab
- Symbol
- ddx39ab Nomenclature History
- Previous Names
-
- ddx39
- ddx39b
- fc16a02
- wu:fc16a02
- zgc:55433
- zgc:85646
- Type
- protein_coding_gene
- Location
- Chr: 3 Mapping Details/Browsers
- Description
- Enables RNA binding activity. Involved in mRNA splicing, via spliceosome. Acts upstream of or within cardiac muscle cell differentiation and lens fiber cell differentiation. Is expressed in several structures, including eye; heart tube; immature eye; liver; and trunk musculature. Orthologous to human DDX39A (DExD-box helicase 39A).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 3 figures from 2 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- MGC:55433 (1 image)
Wild Type Expression Summary
- All Phenotype Data
- 7 figures from Zhang et al., 2018
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR001650 | Helicase, C-terminal domain-like |
| Domain | IPR011545 | DEAD/DEAH box helicase domain |
| Domain | IPR014001 | Helicase superfamily 1/2, ATP-binding domain |
| Domain | IPR014014 | RNA helicase, DEAD-box type, Q motif |
| Homologous_superfamily | IPR027417 | P-loop containing nucleoside triphosphate hydrolase |
1 - 5 of 5
Domain Details Per Protein
| Protein | Additional Resources | Length | DEAD/DEAH box helicase domain | Helicase, C-terminal domain-like | Helicase superfamily 1/2, ATP-binding domain | P-loop containing nucleoside triphosphate hydrolase | RNA helicase, DEAD-box type, Q motif |
|---|---|---|---|---|---|---|---|
| UniProtKB:Q803W0 | InterPro | 427 |
1 - 1 of 1
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
ddx39ab-201
(1)
|
Ensembl | 1,587 nt |
1 - 1 of 1
Interactions and Pathways
No data available
Plasmids
No data available