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ZIRC
ZFIN ID: ZDB-GENE-040426-2621
Gene Name: phosphatidylethanolamine binding protein 1
Gene Symbol: pebp1    Nomenclature History

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Previous Names: pbp, zgc:56033, zgc:76942

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 5 Mapping Details/Browsers
Description: Predicted to be involved in negative regulation of MAPK cascade. Human ortholog(s) of this gene implicated in prostate cancer. Is expressed in retina. Orthologous to human PEBP1 (phosphatidylethanolamine binding protein 1).
Genome Resources: Alliance (1),  Gene:406627 (1),  Ensembl(GRCz11):ENSDARG00000042069 (2)
GENE EXPRESSION
All Expression Data: 3 figures from 3 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [MGC:56033]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Larval:Day 4 (96.0h-120.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS No data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH pebp1 HUMAN ORTHOLOG No data available
DISEASE ASSOCIATED WITH pebp1 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process negative regulation of MAPK cascade (more)
Cellular Component cellular_component (more)
Molecular Function molecular_function (more)
GO Terms (all 3)
PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR008914 (1)
  • InterPro:IPR035810 (1)
  • InterPro:IPR036610 (1)
  • Pfam:PF01161 (1)
  • TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA pebp1-202 (1)    Ensembl 1960
    pebp1-203 (1)    Ensembl 886
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM pebp1 No data available
    MARKER RELATIONSHIPS
    pebp1 Contained in: [Fosmid] CH1073-179P4 (1) (order this)
    pebp1 Encodes: [cDNA] MGC:56033 (1) (order this), MGC:76942 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_213323 (1) 1960 bp
    Genomic GenBank:CU651631 (1) 39048 bp
    Select Tool
    Polypeptide UniProtKB:Q6NYS4 (1) 187 aa
    Sequence Clusters UniGene:83776 (1)
    Sequence Information (all 14)
    ORTHOLOGY for pebp1 ( Chr: 5 )
    CITATIONS (18)