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ZIRC
ZFIN ID: ZDB-GENE-040426-2587
Gene Name: interferon regulatory factor 5
Gene Symbol: irf5
Sequence Ontology ID : SO:0000704

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Attributions

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Previous Names: im:7155364, zgc:76986

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(Including Attributions)
Location: Chr: 4 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have DNA-binding transcription factor activity, RNA polymerase II-specific. Predicted to be involved in immune system process. Predicted to localize to the nucleus. Human ortholog(s) of  ...
GENE EXPRESSION
All Expression Data: 3 figures from 2 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2004 [IMAGE:7155364]
Wild-type Stages, Structures: Zygote:1-cell (0.0h-0.75h) to Adult (90d-730d, breeding adult)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTSNo data available
PHENOTYPE No data available
DISEASE ASSOCIATED WITH irf5 HUMAN ORTHOLOG
Disease Ontology Term OMIM Term OMIM Phenotype ID
inflammatory bowel disease 14 {Inflammatory bowel disease 14} 612245
{Systemic lupus erythematosus, susceptibility to, 10} 612251
DISEASE ASSOCIATED WITH irf5 VIA EXPERIMENTAL MODELS No data available
GENE ONTOLOGY
Ontology GO Term
Biological Process cytokine-mediated signaling pathway (more)
Cellular Component nucleus (more)
Molecular Function DNA-binding transcription factor activity (more)
GO Terms (all 9)
TRANSCRIPTS
Type Name Length (bp) Analysis
ncRNA irf5-003 (1) 2536
mRNA irf5-201 (1) 1551
irf5-204 (1) 548
GENE PRODUCT DESCRIPTION No description available
INTERACTIONS AND PATHWAYS
ANTIBODIESNo data available
PLASMIDSNo data available
CONSTRUCTS WITH SEQUENCES FROM irf5 No data available
MARKER RELATIONSHIPS
irf5Contained in: [BAC] CH211-266A5 (1) (order this)
irf5Encodes: [EST] IMAGE:7155364 (1) (order this)
[cDNA] MGC:76986 (1) (order this)
SEQUENCE INFORMATION
Type Accession # Length (bp/aa) Analysis
RNA RefSeq:NM_212875 (1) 2560bp
Genomic GenBank:BX465210 (1) 171708bp
Select Tool
Polypeptide UniProtKB:B0S682 (1) 516aa
Sequence Clusters UniGene:7758 (1)
Sequence Information (all 16)
ORTHOLOGY for irf5 (Chr: 4)
CITATIONS (28)