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ZIRC
ZFIN ID: ZDB-GENE-040426-2528
Gene Name: suppressor of cytokine signaling 3b
Gene Symbol: socs3b
Sequence Ontology ID : SO:0000704

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Previous Name: zgc:77038

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(Including Attributions)
Location: Chr: 12 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to be involved in several processes, including negative regulation of apoptotic process; protein ubiquitination; and receptor signaling pathway via JAK-STAT. Human ortholog(s) of this gene  ...
GENE EXPRESSION
All Expression Data: 18 figures from 10 publications
Directly Submitted Expression Data: 6 figures (9 images) from Thisse et al., 2004 [MGC:77038]
Wild-type Stages, Structures: Segmentation:14-19 somites (16.0h-19.0h) to Juvenile:Days 30-44 (30d-45d, 10 mm, adult fins/pigment)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
ihb32 Indel Unknown Unknown TALEN
ihb36 Small Deletion Unknown Unknown TALEN
  • China Zebrafish Resource Center (CZRC) (order this)
  • sa35352 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa35353 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • Targeting reagents:
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH socs3b HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH socs3b VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process intracellular signal transduction (more)
    Cellular Component cytoplasm (more)
    Molecular Function 1-phosphatidylinositol-3-kinase regulator activity (more)
    GO Terms (all 12)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA socs3b-201 (1) 2155
    socs3b-202 (1) 874
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM socs3b No data available
    MARKER RELATIONSHIPS
    socs3bContained in: [BAC] CH73-360C16 (1) (order this)
    socs3bEncodes: [cDNA] MGC:77038 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_213304 (1) 2079bp
    Genomic GenBank:CU855552 (1) 59655bp
    Select Tool
    Polypeptide UniProtKB:Q6NYJ2 (1) 210aa
    Sequence Clusters UniGene:81607 (1)
    Sequence Information (all 15)
    ORTHOLOGY for socs3b (Chr: 12)
    CITATIONS (61)