Gene

rpf2

ID

ZDB-GENE-040426-2501

Name

ribosome production factor 2 homolog

Symbol

rpf2 Nomenclature History

Previous Names

bxdc1
ik:tdsubc_1a3 (1)
wu:fe17d08 (1)
wu:fj16d06 (1)
xx:tdsubc_1a3 (1)
zgc:77150

Type

protein_coding_gene

Location

Chr: 20 Mapping Details/Browsers

Description

Predicted to have rRNA binding activity. Predicted to be involved in maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) and ribosomal large subunit assembly. Predicted to localize to nucleolus. Is expressed in several structures, including alar plate midbrain region; blood; head; midbrain; and segmental plate. Orthologous to human RPF2 (ribosome production factor 2 homolog).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

7 figures from 2 publications

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Thisse Expression Data

MGC:77150 (23 images)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With rpf2 Human Ortholog

No data available

Associated With rpf2 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR007109	Brix domain
Family	IPR039770	Ribosome biogenesis protein Rpf2

Domain Details Per Protein

Protein	Length	Brix domain	Ribosome biogenesis protein Rpf2
UniProtKB:Q6P0C5 InterPro	308

Transcripts

Genome Browsers

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	rpf2-201 (1) Ensembl	Havana	1808 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations