Gene

rnft1

ID
ZDB-GENE-040426-2324
Name
ring finger protein, transmembrane 1
Symbol
rnft1 Nomenclature History
Previous Names
  • wu:fe23b06
  • zgc:77306 (1)
Type
protein_coding_gene
Location
Chr: 10 Mapping Details/Browsers
Description
Predicted to have metal ion binding activity and transferase activity. Predicted to be involved in protein ubiquitination. Predicted to localize to endoplasmic reticulum; endoplasmic reticulum membrane; and integral component of membrane. Orthologous to human RNFT1 (ring finger protein, transmembrane 1).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
1 figure from Thisse et al., 2004
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
No data available
Sequence Targeting Reagents
No data available
Human Disease
Associated With rnft1 Human Ortholog
No data available
Associated With rnft1 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR017907 Zinc finger, RING-type, conserved site
Domain IPR001841 Zinc finger, RING-type
Family IPR044235 E3 ubiquitin-protein ligase 1/2
Homologous_superfamily IPR013083 Zinc finger, RING/FYVE/PHD-type
1 - 4 of 4
Domain Details Per Protein
Protein Length E3 ubiquitin-protein ligase 1/2 Zinc finger, RING/FYVE/PHD-type Zinc finger, RING-type Zinc finger, RING-type, conserved site
UniProtKB:Q6NZ21 419
1 - 1 of 1
Transcripts
Genome Browsers
Genome Build: GRCz11Chromosome: 10
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA rnft1-201 (1) Ensembl 2,184 nt
ncRNA rnft1-002 (1) Ensembl 716 nt
1 - 2 of 2
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
No data available
Marker Relationships
Relationship Marker Type Marker Accession Numbers Citations
Contained inBACDKEY-149M16ZFIN Curated Data
EncodesESTfe23b06ZFIN Curated Data
EncodescDNAMGC:77306ZFIN Curated Data
1 - 3 of 3
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Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Species Symbol Chromosome Accession # Evidence
HumanRNFT117
Amino acid sequence comparison (1)
Conserved genome location (synteny) (2)
MouseRnft111
Conserved genome location (synteny) (1)
Amino acid sequence comparison (1)
Citations
1 - 2 of 2
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