ZFIN is now using GRCz12tu for Genomic Data
Gene
sumo3a
- ID
- ZDB-GENE-040426-2133
- Name
- small ubiquitin like modifier 3a
- Symbol
- sumo3a Nomenclature History
- Previous Names
- Type
- protein_coding_gene
- Location
- Chr: 6 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable protein tag activity and ubiquitin-like protein ligase binding activity. Acts upstream of or within chordate embryonic development and definitive hemopoiesis. Predicted to be located in PML body and cytoplasm. Predicted to be active in nucleus. Is expressed in brain; cranial neural crest cell; digestive system; eye; and pectoral fin bud. Orthologous to human SUMO3 (small ubiquitin like modifier 3).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 4 figures from 2 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Additional Resources | Length | Rad60/SUMO-like domain | Ubiquitin-like domain | Ubiquitin-like domain superfamily |
|---|---|---|---|---|---|
| UniProtKB:Q6NV25 | InterPro | 94 |
- Genome Browsers
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
sumo3a-201
(1)
|
Ensembl | 1,487 nt | ||
| ncRNA |
sumo3a-002
(1)
|
Ensembl | 825 nt | ||
| ncRNA |
sumo3a-003
(1)
|
Ensembl | 808 nt | ||
| ncRNA |
sumo3a-004
(1)
|
Ensembl | 723 nt | ||
| ncRNA |
sumo3a-005
(1)
|
Ensembl | 961 nt | ||
| ncRNA |
sumo3a-006
(1)
|
Ensembl | 582 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers