Gene

bgnb

ID
ZDB-GENE-040426-21
Name
biglycan b
Symbol
bgnb Nomenclature History
Previous Names
  • zgc:77123 (1)
Type
protein_coding_gene
Location
Chr: 23 Mapping Details/Browsers
Description
Predicted to localize to extracellular space. Is expressed in several structures, including alar plate midbrain region; central nervous system; neurons; pectoral fin; and pectoral fin bud. Orthologous to human BGN (biglycan).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
14 figures from 2 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With bgnb Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
Meester-Loeys syndrome Alliance Meester-Loeys syndrome 300989
X-linked spondyloepimetaphyseal dysplasia Alliance Spondyloepimetaphyseal dysplasia, X-linked 300106
Associated With bgnb Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR000372 Leucine-rich repeat N-terminal domain
Family IPR016352 Small leucine-rich proteoglycan, class I, decorin/asporin/byglycan
Family IPR050333 Small Leucine-Rich Proteoglycans
Homologous_superfamily IPR032675 Leucine-rich repeat domain superfamily
Repeat IPR001611 Leucine-rich repeat
Repeat IPR003591 Leucine-rich repeat, typical subtype
Domain Details Per Protein
Protein Length Leucine-rich repeat Leucine-rich repeat domain superfamily Leucine-rich repeat N-terminal domain Leucine-rich repeat, typical subtype Small leucine-rich proteoglycan, class I, decorin/asporin/byglycan Small Leucine-Rich Proteoglycans
UniProtKB:B7ZDB5 374
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA bgnb-201 (1) Ensembl 2,844 nt
ncRNA bgnb-002 (1) Ensembl 2,968 nt
ncRNA bgnb-003 (1) Ensembl 455 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations