Gene

snn

ID

ZDB-GENE-040426-1987

Name

stannin

Symbol

snn Nomenclature History

Previous Names

fj47f06
wu:fj47f06
zgc:73221

Type

protein_coding_gene

Location

Chr: 3 Mapping Details/Browsers

Description

Predicted to localize to integral component of membrane. Orthologous to human SNN (stannin).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

1 figure from Thisse et al., 2004

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

MGC:73221 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With snn Human Ortholog

No data available

Associated With snn Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR015135	Stannin transmembrane
Domain	IPR015136	Stannin unstructured linker
Domain	IPR015137	Stannin cytoplasmic
Family	IPR038747	Stannin
Homologous_superfamily	IPR027435	Stannin superfamily

Domain Details Per Protein

Protein	Length	Stannin	Stannin cytoplasmic	Stannin superfamily	Stannin transmembrane	Stannin unstructured linker
UniProtKB:Q6P957 InterPro	87

Transcripts

Genome Browsers

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
mRNA	snn-201 (1) Ensembl	Ensembl		1,232 nt	Select Tool ZFIN BLAST
mRNA	snn-202 (1) Ensembl	Ensembl		1,569 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations