ZFIN is now using GRCz12tu for Genomic Data

Gene

s100a10b

ID

ZDB-GENE-040426-1937

Name

S100 calcium binding protein A10b

Symbol

s100a10b Nomenclature History

Previous Names

hm:zehn1116
wu:fa94d11
wu:fb05h04
zgc:56142

Type

protein_coding_gene

Location

Chr: 16 Mapping Details/Browsers

Genome Assembly

GRCz12tu

Annotation Status

Current

Description

Predicted to enable calcium ion binding activity and calcium-dependent protein binding activity. Predicted to be active in cytoplasm. Is expressed in several structures, including digestive system; ectoderm; hematopoietic system; lens; and solid lens vesicle. Orthologous to human S100A10 (S100 calcium binding protein A10).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

14 figures from 5 publications

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

MGC:56142 (4 images)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With s100a10b Human Ortholog

No data available

Associated With s100a10b Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Binding_site	IPR018247	EF-Hand 1, calcium-binding site
Conserved_site	IPR001751	S100/Calcium binding protein 7/8-like, conserved site
Domain	IPR002048	EF-hand domain
Domain	IPR013787	S100/CaBP-9k-type, calcium binding, subdomain
Homologous_superfamily	IPR011992	EF-hand domain pair

Domain Details Per Protein

Protein	Additional Resources	Length	EF-Hand 1, calcium-binding site	EF-hand domain	EF-hand domain pair	S100/CaBP-9k-type, calcium binding, subdomain	S100/Calcium binding protein 7/8-like, conserved site
UniProtKB:Q7ZVA4	InterPro	100

Transcripts

Genome Browsers

NCBI Map Viewer

ZFIN

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	s100a10b-201 (1) Ensembl	Ensembl	576 nt	Select Tool ZFIN BLAST
mRNA	s100a10b-202 (1) Ensembl	Ensembl	862 nt	Select Tool ZFIN BLAST
ncRNA	s100a10b-002 (1) Ensembl	Ensembl	452 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Genome Browsers

NCBI Map Viewer

ZFIN

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations