Gene

rpl8

ID

ZDB-GENE-040426-1670

Name

ribosomal protein L8

Symbol

rpl8 Nomenclature History

Previous Names

zgc:73105 (1)
zgc:77641 (1)

Type

protein_coding_gene

Location

Chr: 9 Mapping Details/Browsers

Description

Predicted to have RNA binding activity. Predicted to be a structural constituent of ribosome. Predicted to be involved in cytoplasmic translation. Predicted to localize to cytosolic large ribosomal subunit. Is expressed in endodermal cell; intestine; liver; and pancreas. Orthologous to human RPL8 (ribosomal protein L8).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

2 figures from 2 publications

Cross-Species Comparison

High Throughput Data

Expression Atlas

Thisse Expression Data

MGC:73105 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With rpl8 Human Ortholog

No data available

Associated With rpl8 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Conserved_site	IPR022671	Ribosomal protein L2, conserved site
Domain	IPR022666	Ribosomal Proteins L2, RNA binding domain
Domain	IPR022669	Ribosomal protein L2, C-terminal
Family	IPR002171	Ribosomal protein L2
Family	IPR023672	Ribosomal protein L2, archaeal-type
Homologous_superfamily	IPR008991	Translation protein SH3-like domain superfamily
Homologous_superfamily	IPR012340	Nucleic acid-binding, OB-fold
Homologous_superfamily	IPR014722	Ribosomal protein L2, domain 2
Homologous_superfamily	IPR014726	Ribosomal protein L2, domain 3

Domain Details Per Protein

Protein	Length	Nucleic acid-binding, OB-fold	Ribosomal protein L2	Ribosomal protein L2, archaeal-type	Ribosomal protein L2, conserved site	Ribosomal protein L2, C-terminal	Ribosomal protein L2, domain 2	Ribosomal protein L2, domain 3	Ribosomal Proteins L2, RNA binding domain	Translation protein SH3-like domain superfamily
UniProtKB:Q6P0V6 InterPro	257
UniProtKB:D6QWY4 InterPro	69
UniProtKB:B0S6P5 InterPro	124

Transcripts

Genome Browsers

Type	Name	Length (nt)	Analysis
mRNA	rpl8-203 (1) Ensembl	926 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	rpl8-204 (1) Ensembl	967 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	rpl8-003 (1) Ensembl	718 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations