Gene

c6.1

ID
ZDB-GENE-040426-1358
Name
complement component 6, duplicate 1
Symbol
c6.1 Nomenclature History
Previous Names
  • c6
Type
protein_coding_gene
Location
Chr: 21 Mapping Details/Browsers
Description
Predicted to be involved in complement activation. Predicted to localize to membrane attack complex. Human ortholog(s) of this gene implicated in complement component 6 deficiency. Is expressed in epidermis; gut; liver; periderm; and pharyngeal arch 3-7 skeleton. Orthologous to human C6 (complement C6).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
11 figures from 7 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With c6.1 Human Ortholog
Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
complement component 6 deficiency Alliance C6 deficiency 612446
Associated With c6.1 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR020863 Membrane attack complex component/perforin domain, conserved site
Conserved_site IPR023415 Low-density lipoprotein (LDL) receptor class A, conserved site
Domain IPR000436 Sushi/SCR/CCP domain
Domain IPR003884 Factor I / membrane attack complex
Domain IPR020864 Membrane attack complex component/perforin (MACPF) domain
Domain IPR048828 Complement component C6, KAZAL domain
Domain IPR048831 Complement components C8A/B/C6, EGF-like domain
Family IPR001862 Membrane attack complex component/perforin/complement C9
Homologous_superfamily IPR035976 Sushi/SCR/CCP superfamily
Homologous_superfamily IPR036055 LDL receptor-like superfamily
Homologous_superfamily IPR036383 Thrombospondin type-1 (TSP1) repeat superfamily
Repeat IPR000884 Thrombospondin type-1 (TSP1) repeat
Repeat IPR002172 Low-density lipoprotein (LDL) receptor class A repeat
Domain Details Per Protein
Protein Length Complement component C6, KAZAL domain Complement components C8A/B/C6, EGF-like domain Factor I / membrane attack complex LDL receptor-like superfamily Low-density lipoprotein (LDL) receptor class A, conserved site Low-density lipoprotein (LDL) receptor class A repeat Membrane attack complex component/perforin/complement C9 Membrane attack complex component/perforin domain, conserved site Membrane attack complex component/perforin (MACPF) domain Sushi/SCR/CCP domain Sushi/SCR/CCP superfamily Thrombospondin type-1 (TSP1) repeat Thrombospondin type-1 (TSP1) repeat superfamily
UniProtKB:A0A8M2B830 840
UniProtKB:Q6PFT2 885
UniProtKB:A0A8M2B846 905
UniProtKB:A0A8M9Q791 840
UniProtKB:A0A8M6Z3V5 790
UniProtKB:A0A8M9PDC6 718
UniProtKB:A0A8M9PIV7 642
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA c6-208 (1) Ensembl 3,002 nt
mRNA c6-209 (1) Ensembl 834 nt
mRNA c6-210 (1) Ensembl 2,565 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations