ZFIN is now using GRCz12tu for Genomic Data

Gene

ubl7b

ID

ZDB-GENE-040426-1334

Name

ubiquitin-like 7b (bone marrow stromal cell-derived)

Symbol

ubl7b Nomenclature History

Previous Names

ubl7
ubl7a
zgc:64009 (1)

Type

protein_coding_gene

Location

Chr: 18 Mapping Details/Browsers

Genome Assembly

GRCz12tu

Annotation Status

Current

Description

Orthologous to human UBL7 (ubiquitin like 7).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

1 figure from Thisse et al., 2004

Cross-Species Comparison

High Throughput Data

GEO (1)

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Thisse Expression Data

MGC:64009 (1 image)

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With ubl7b Human Ortholog

No data available

Associated With ubl7b Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

Type	InterPro ID	Name
Domain	IPR000626	Ubiquitin-like domain
Domain	IPR015940	Ubiquitin-associated domain
Domain	IPR047877	Ubiquitin-like protein 7, ubiquitin-like domain
Domain	IPR047878	Ubiquitin-like protein 7, UBA domain
Family	IPR015496	Ubiquilin
Homologous_superfamily	IPR009060	UBA-like superfamily
Homologous_superfamily	IPR029071	Ubiquitin-like domain superfamily

Domain Details Per Protein

Protein	Additional Resources	Length	UBA-like superfamily	Ubiquilin	Ubiquitin-associated domain	Ubiquitin-like domain	Ubiquitin-like domain superfamily	Ubiquitin-like protein 7, UBA domain	Ubiquitin-like protein 7, ubiquitin-like domain
UniProtKB:A0A8M2BKY3	InterPro	364
UniProtKB:A0A8M2BLB6	InterPro	371
UniProtKB:Q7T3A5	InterPro	365

Transcripts

Genome Browsers

NCBI Map Viewer

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
mRNA	ubl7b-201 (1) Ensembl	Ensembl		1,236 nt	Select Tool ZFIN BLAST
mRNA	ubl7b-205 (1) Ensembl	Ensembl		804 nt	Select Tool ZFIN BLAST
mRNA	ubl7b-207 (1) Ensembl	Ensembl		2,330 nt	Select Tool ZFIN BLAST
ncRNA	ubl7b-002 (1) Ensembl	Ensembl		850 nt	Select Tool ZFIN BLAST
ncRNA	ubl7b-003 (1) Ensembl	Ensembl		892 nt	Select Tool ZFIN BLAST
ncRNA	ubl7b-004 (1) Ensembl	Ensembl		1,289 nt	Select Tool ZFIN BLAST
ncRNA	ubl7b-005 (1) Ensembl	Ensembl		720 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

No data available

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Genome Browsers

NCBI Map Viewer

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations