Gene

surf6

ID
ZDB-GENE-040426-1333
Name
surfeit 6
Symbol
surf6 Nomenclature History
Previous Names
  • surf6l (1)
  • zgc:64008
Type
protein_coding_gene
Location
Chr: 5 Mapping Details/Browsers
Description
Acts upstream of or within heart development. Predicted to be located in nucleus. Is expressed in several structures, including alar plate midbrain region; immature eye; midbrain; retina; and segmental plate. Orthologous to human SURF6 (surfeit 6).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
6 figures from Thisse et al., 2004
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
3 figures from 3 publications
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Allele Type Localization Consequence Mutagen Supplier
hi1769TgTransgenic insertionIntron 1UnknownDNA
la011650TgTransgenic insertionUnknownUnknownDNA
la015649TgTransgenic insertionUnknownUnknownDNA
la024990TgTransgenic insertionUnknownUnknownDNA
sa20466Allele with one point mutationUnknownPremature StopENU
sa25303Allele with one point mutationUnknownSplice SiteENU
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Sequence Targeting Reagents
No data available
Human Disease
Associated With surf6 Human Ortholog
No data available
Associated With surf6 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Domain IPR029190 Ribosomal RNA-processing protein 14/surfeit locus protein 6, C-terminal domain
Family IPR007019 Surfeit locus 6
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Domain Details Per Protein
Protein Additional Resources Length Ribosomal RNA-processing protein 14/surfeit locus protein 6, C-terminal domain Surfeit locus 6
UniProtKB:Q7T3A6 InterPro 362
UniProtKB:Q6DRK9 InterPro 362
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Transcripts
Genome Browsers
Genome Build: GRCz11Chromosome: 5
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA surf6-201 (1) Ensembl 1,378 nt
mRNA surf6-202 (1) Ensembl 1,500 nt
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Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
No data available
Marker Relationships
Relationship Marker Type Marker Accession Numbers Citations
Contained inBACCH73-278C20ZFIN Curated Data
Contained inBACDKEY-226M8ZFIN Curated Data
EncodesESTwz12865
    ZFIN Curated Data
    EncodescDNAMGC:64008ZFIN Curated Data
    EncodescDNAMGC:191362ZFIN Curated Data
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    Sequences
    Orthology
    Comparative Orthology
    Alliance
    Gene Tree
    Ensembl
    Species Symbol Chromosome Accession # Evidence
    HumanSURF69
    Amino acid sequence comparison (2)
    Conserved genome location (synteny) (1)
    Citations
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