Gene

pdcd6

ID
ZDB-GENE-040426-1307
Name
programmed cell death 6
Symbol
pdcd6 Nomenclature History
Previous Names
  • zgc:63952 (1)
Type
protein_coding_gene
Location
Chr: 24 Mapping Details/Browsers
Description
Predicted to have calcium ion binding activity. Is expressed in notochord; pectoral fin cartilage; and pharyngeal arch 3-7 skeleton. Orthologous to human PDCD6 (programmed cell death 6).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
4 figures from Thisse et al., 2004
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
No data available
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With pdcd6 Human Ortholog
No data available
Associated With pdcd6 Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Binding_site IPR018247 EF-Hand 1, calcium-binding site
Domain IPR002048 EF-hand domain
Family IPR051426 Peflin/Sorcin Calcium-Binding
Homologous_superfamily IPR011992 EF-hand domain pair
Domain Details Per Protein
Protein Length EF-Hand 1, calcium-binding site EF-hand domain EF-hand domain pair Peflin/Sorcin Calcium-Binding
UniProtKB:Q7T3D5 185
Transcripts
Genome Browsers
Type Name Annotation Method Has Havana Data Length (nt) Analysis
mRNA pdcd6-201 (1) Ensembl 1,278 nt
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations