Gene

srm

ID
ZDB-GENE-040426-1183
Name
spermidine synthase
Symbol
srm Nomenclature History
Previous Names
  • fa18b03
  • id:ibd1177
  • wu:fa18b03
  • zgc:63600
Type
protein_coding_gene
Location
Chr: 23 Mapping Details/Browsers
Description
Predicted to have spermidine synthase activity. Involved in spermidine biosynthetic process. Is expressed in forebrain; immature eye; optic tectum; and tail bud. Orthologous to human SRM (spermidine synthase).
Genome Resources
Note
None
Comparative Information
Expression
All Expression Data
3 figures from 3 publications
Cross-Species Comparison
High Throughput Data
Thisse Expression Data
Wild Type Expression Summary
Phenotype
All Phenotype Data
5 figures from Frohnhöfer et al., 2016
Cross-Species Comparison
Alliance
Phenotype Summary
Mutations
Mutants
Sequence Targeting Reagents
Human Disease
Associated With srm Human Ortholog
No data available
Associated With srm Via Experimental Models
No data available
Gene Ontology
Protein Domains
Domain, Family, and Site Summary
Type InterPro ID Name
Conserved_site IPR030373 Polyamine biosynthesis domain, conserved site
Domain IPR030374 Polyamine biosynthesis domain
Domain IPR035246 Spermidine synthase, tetramerisation domain
Family IPR001045 Spermidine/spermine synthases
Family IPR030668 Spermidine/spermine synthase, eukaryotes
Homologous_superfamily IPR029063 S-adenosyl-L-methionine-dependent methyltransferase
Homologous_superfamily IPR037163 Spermidine synthase, tetramerisation domain superfamily
Domain Details Per Protein
Protein Length Polyamine biosynthesis domain Polyamine biosynthesis domain, conserved site S-adenosyl-L-methionine-dependent methyltransferase Spermidine/spermine synthase, eukaryotes Spermidine/spermine synthases Spermidine synthase, tetramerisation domain Spermidine synthase, tetramerisation domain superfamily
UniProtKB:Q7SY20 289
UniProtKB:F1R3G8 289
Transcripts
Genome Browsers
Interactions and Pathways
No data available
Antibodies
No data available
Plasmids
No data available
Constructs
Marker Relationships
Sequences
Orthology
Comparative Orthology
Alliance
Gene Tree
Ensembl
Citations