header logo image header logo text
Downloads Login
Research
General Information
ZIRC
ZFIN ID: ZDB-GENE-040426-1137
Gene Name: interferon regulatory factor 6
Gene Symbol: irf6
Sequence Ontology ID : SO:0000704

{{control.fieldName}} Edit

ID: {{control.nomenID}}
{{control.fieldName}}:
Reason:
Comments:

Attributions

{{pub.zdbID}}
Previous Name: zgc:63500 (1)

Add new Alias

Alias
Attribution

Attributions for Alias: {{control.newAlias}}

{{pub.zdbID}}

Delete Alias:

(Including Attributions)
Location: Chr: 22 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have DNA-binding transcription factor activity, RNA polymerase II-specific. Involved in embryonic neurocranium morphogenesis and epithelium development. Predicted to localize to the  ...
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
sa11387 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa19276 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • zf2064 Small Deletion Exon 6 Frameshift, Premature Stop CRISPR
    Targeting reagents:
    DISEASE ASSOCIATED WITH irf6 HUMAN ORTHOLOG
    Disease Ontology Term OMIM Term OMIM Phenotype ID
    popliteal pterygium syndrome Popliteal pterygium syndrome 1 119500
    Van der Woude syndrome van der Woude syndrome 119300
    {Orofacial cleft 6} 608864
    DISEASE ASSOCIATED WITH irf6 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process embryonic neurocranium morphogenesis (more)
    Cellular Component nucleus (more)
    Molecular Function DNA-binding transcription factor activity (more)
    GO Terms (all 8)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA irf6-201 (1) 831
    irf6-202 (1) 2746
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIES
    PLASMIDSNo data available
    MARKER RELATIONSHIPS
    irf6Contained in: [BAC] CH211-103A14 (1) (order this)
    irf6Encodes: [cDNA] MGC:63500 (1) (order this)
    irf6Has Artifact: [cDNA] MGC:165439 (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_200598 (1) 2752bp
    Genomic GenBank:CU570769 (1) 135885bp
    Select Tool
    Polypeptide UniProtKB:Q6PGZ7 (1) 492aa
    Sequence Clusters UniGene:81664 (1)
    Sequence Information (all 16)
    ORTHOLOGY for irf6 (Chr: 22)
    CITATIONS (33)