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ZIRC
ZFIN ID: ZDB-GENE-040426-1064
Gene Name: calsyntenin 1
Gene Symbol: clstn1
Sequence Ontology ID : SO:0000704

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Previous Names: fm67g03, wu:fk52g02, wu:fm67g03, zgc:153744, zgc:56528 (1)

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(Including Attributions)
Location: Chr: 23 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have calcium ion binding activity; involved in several processes, including axonal transport, establishment or maintenance of microtubule cytoskeleton polarity, and generation of  ...
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la014397Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la028538Tg Transgenic Insertion Unknown Unknown DNA
    sa14307 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa16000 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • uw7 Small Deletion Exon 2 Frameshift, Premature Stop TALEN
    uw8 Small Deletion Unknown Frameshift, Premature Stop TALEN
    uw9 Indel Unknown Frameshift TALEN
    Targeting reagents:
    DISEASE ASSOCIATED WITH clstn1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH clstn1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process homophilic cell adhesion via plasma membrane adhesion molecules (more)
    Cellular Component integral component of membrane (more)
    Molecular Function calcium ion binding (more)
    GO Terms (all 9)
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    ncRNA clstn1-003 (1) 1770
    mRNA clstn1-201 (1) 2895
    clstn1-203 (1) 6281
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM clstn1 No data available
    MARKER RELATIONSHIPS
    clstn1Contained in: [BAC] DKEY-259L18 (1) (order this), DKEY-279E7 (1) (order this)
    clstn1Encodes: [EST] fk52g02, fm67g03
    [cDNA] MGC:56528 (1) (order this), MGC:153744 (1) (order this), MGC:165444 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001077784 (1) 3647bp
    Genomic GenBank:BX571850 (1) 236136bp Blast at MegaBLAST
    Polypeptide UniProtKB:E7EYL3 (1) 971aa
    Sequence Clusters UniGene:53665 (1)
    Sequence Information (all 35)
    ORTHOLOGY for clstn1 (Chr: 23)
    CITATIONS (30)