Gene
scarb1
- ID
- ZDB-GENE-031126-1
- Name
- scavenger receptor class B, member 1
- Symbol
- scarb1 Nomenclature History
- Previous Names
-
- cb1015 (1)
- Type
- protein_coding_gene
- Location
- Chr: 10 Mapping Details/Browsers
- Description
- Predicted to enable lipid binding activity; low-density lipoprotein particle binding activity; and scavenger receptor activity. Acts upstream of or within regulation of developmental pigmentation and regulation of fertilization. Predicted to be located in membrane. Predicted to be active in caveola and cell surface. Is expressed in intestine; segmental plate; somite; xanthophore; and yolk syncytial layer. Orthologous to human SCARB1 (scavenger receptor class B member 1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 11 figures from 6 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- cb1015 (5 images)
Wild Type Expression Summary
Phenotype Summary
Mutations
Human Disease
| Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
|---|---|---|---|
| [High density lipoprotein cholesterol level QTL6] | 610762 |
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Length | CD36 family | CD36/scavenger receptor class B member 1 |
|---|---|---|---|
|
UniProtKB:A0A8M6Z8R4
|
511 | ||
|
UniProtKB:A0A0R4IRL8
|
496 | ||
|
UniProtKB:A0A0R4IQE0
|
505 | ||
|
UniProtKB:A0A0R4IDW0
|
492 |
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| aberrant processed transcript |
scarb1-206
(1)
|
Ensembl | 844 nt | ||
| mRNA | scarb1-001_dup (1) | 1,491 nt | |||
| mRNA |
scarb1-201
(1)
|
Ensembl | 773 nt | ||
| mRNA |
scarb1-202
(1)
|
Ensembl | 4,451 nt | ||
| mRNA |
scarb1-203
(1)
|
Ensembl | 436 nt | ||
| mRNA |
scarb1-204
(1)
|
Ensembl | 2,598 nt | ||
| mRNA |
scarb1-205
(1)
|
Ensembl | 4,412 nt | ||
| mRNA |
scarb1-207
(1)
|
Ensembl | 6,606 nt |
Interactions and Pathways
No data available
Plasmids
No data available