ZFIN is now using GRCz12tu for Genomic Data
Gene
agps
- ID
- ZDB-GENE-031118-14
- Name
- alkylglycerone phosphate synthase
- Symbol
- agps Nomenclature History
- Previous Names
-
- fd16e06
- wu:fd16e06
- zgc:56718
- Type
- protein_coding_gene
- Location
- Chr: 9 Mapping Details/Browsers
- Genome Assembly
- GRCz12tu
- Annotation Status
- Current
- Description
- Predicted to enable alkylglycerone-phosphate synthase activity. Predicted to be involved in lipid biosynthetic process. Predicted to act upstream of or within lipid metabolic process. Predicted to be active in peroxisome. Human ortholog(s) of this gene implicated in rhizomelic chondrodysplasia punctata and rhizomelic chondrodysplasia punctata type 3. Orthologous to human AGPS (alkylglycerone phosphate synthase).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 3 figures from 3 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- MGC:56718 (1 image)
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
| Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
|---|---|---|---|
| rhizomelic chondrodysplasia punctata type 3 | Alliance | Rhizomelic chondrodysplasia punctata, type 3 | 600121 |
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR004113 | FAD-binding oxidoreductase/transferase, type 4, C-terminal |
| Domain | IPR006094 | FAD linked oxidase, N-terminal |
| Domain | IPR016166 | FAD-binding domain, PCMH-type |
| Family | IPR025650 | Alkyldihydroxyacetonephosphate synthase |
| Homologous_superfamily | IPR016164 | FAD-linked oxidase-like, C-terminal |
| Homologous_superfamily | IPR016167 | FAD-binding, type PCMH, subdomain 1 |
| Homologous_superfamily | IPR016169 | FAD-binding, type PCMH, subdomain 2 |
| Homologous_superfamily | IPR016171 | Vanillyl-alcohol oxidase, C-terminal subdomain 2 |
| Homologous_superfamily | IPR036318 | FAD-binding, type PCMH-like superfamily |
Domain Details Per Protein
| Protein | Additional Resources | Length | Alkyldihydroxyacetonephosphate synthase | FAD-binding domain, PCMH-type | FAD-binding oxidoreductase/transferase, type 4, C-terminal | FAD-binding, type PCMH-like superfamily | FAD-binding, type PCMH, subdomain 1 | FAD-binding, type PCMH, subdomain 2 | FAD-linked oxidase-like, C-terminal | FAD linked oxidase, N-terminal | Vanillyl-alcohol oxidase, C-terminal subdomain 2 |
|---|---|---|---|---|---|---|---|---|---|---|---|
| UniProtKB:Q7ZVJ9 | InterPro | 629 | |||||||||
| UniProtKB:A0A8M9PRZ0 | InterPro | 602 | |||||||||
| UniProtKB:A0AB32TUH9 | InterPro | 604 |
- Genome Browsers
Interactions and Pathways
No data available
Plasmids
No data available
- Genome Browsers