ZFIN ID: ZDB-GENE-030925-30
Gene Name: zinc finger, SWIM-type containing 5
Gene Symbol: zswim5
Sequence Ontology ID : SO:0000704

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Previous Names: fc05d01, sb:cb802 (1), si:ch73-38p6.1, wu:fc05d01

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(Including Attributions)
Location: Chr: 2 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to be involved in regulation of axon guidance; predicted to localize to the Cul2-RING ubiquitin ligase complex; orthologous to human ZSWIM5 (zinc finger SWIM-type containing 5).
GENE EXPRESSION
Directly Submitted Expression Data: 6 figures (12 images) from Thisse et al., 2001 [cb802]
Wild-type Stages, Structures: Gastrula:50%-epiboly (5.25h-5.66h) to Hatching:Long-pec (48.0h-60.0h)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la023558Tg Transgenic Insertion Unknown Unknown DNA
la028775Tg Transgenic Insertion Unknown Unknown DNA
sa14813 Point Mutation Unknown Splice Site ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • PHENOTYPE No data available
    DISEASE ASSOCIATED WITH zswim5 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH zswim5 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY No data available
    PROTEIN FAMILIES, DOMAINS AND SITES No links to external sites available
    TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA zswim5-201 (1) 6228
    GENE PRODUCT DESCRIPTION No description available
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM zswim5 No data available
    MARKER RELATIONSHIPS
    zswim5Contained in: [BAC] CH73-38P6 (1) (order this), CH73-176G19 (1) (order this)
    zswim5Encodes: [EST] cb802 (1) (order this), fc05d01
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001144819 (1)
    Genomic GenBank:CU571330 (1) 133116bp
    Select Tool
    Polypeptide UniProtKB:B8JLP8 (1) 1151aa
    Sequence Clusters UniGene:75738 (1)
    Sequence Information (all 10)
    OTHER zswim5 GENE PAGES
  • Alliance (1)
  • Gene:100149522 (1)
  • VEGA:OTTDARG00000029047 (1)
  • Ensembl(GRCz11):ENSDARG00000055900 (2)
  • ORTHOLOGY for zswim5 (Chr: 2)
    CITATIONS (17)