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ZIRC
ZFIN ID: ZDB-GENE-030829-26
Gene Name: pericentrin
Gene Symbol: pcnt    Nomenclature History

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Previous Names: fc85c01, sb:cb754 (1), si:ch211-245b3.1, wu:fc85c01

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(Including Attributions)
Gene Type: protein_coding_gene
Location: Chr: 6 Mapping Details/Browsers
Description: Predicted to have DNA binding activity. Predicted to be involved in signal transduction. Human ortholog(s) of this gene implicated in microcephalic osteodysplastic primordial dwarfism type II. Is expressed in several structures, including digestive system; heart tube; nervous system; pectoral fin musculature; and pronephric duct. Orthologous to human PCNT (pericentrin).
Genome Resources: Alliance (1),  Gene:325536 (1),  Ensembl(GRCz11):ENSDARG00000033012 (2)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
la029171Tg Transgenic Insertion Unknown Unknown DNA
  • Zebrafish International Resource Center (ZIRC) (order this)
  • sa7031 Point Mutation Unknown Premature Stop ENU
    sa33823 Point Mutation Unknown Premature Stop ENU
  • European Zebrafish Resource Center (EZRC) (order this)
  • Zebrafish International Resource Center (ZIRC) (order this)
  • tup2 Insertion Exon 2 Unknown CRISPR
    tup5 Small Deletion Exon 2 Unknown CRISPR
    Sequence Targeting Reagents
    Targeting Reagent Created Alleles Publications
    CRISPR1-pcnt 1
    PHENOTYPE
    Data: Fig. 1 from Sepulveda et al., 2018
    Observed in:
    DISEASE ASSOCIATED WITH pcnt HUMAN ORTHOLOG
    Disease Ontology Term Multi-Species Data OMIM Term OMIM Phenotype ID
    microcephalic osteodysplastic primordial dwarfism type II Alliance Microcephalic osteodysplastic primordial dwarfism, type II 210720
    DISEASE ASSOCIATED WITH pcnt VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process signal transduction (more)
    Molecular Function DNA binding (more)
    GO Terms (all 3)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR005539 (1)
  • InterPro:IPR019528 (1)
  • InterPro:IPR028745 (1)
  • Pfam:PF10495 (1)
  • TRANSCRIPTS
    Type Name Length (nt) Analysis
    mRNA pcnt-201 (1)    Ensembl 13210
    Browsers: UCSCNCBIEnsemblZFIN
    INTERACTIONS AND PATHWAYS
    ANTIBODIES No data available
    PLASMIDS No data available
    CONSTRUCTS WITH SEQUENCES FROM pcnt No data available
    MARKER RELATIONSHIPS
    pcnt Contained in: [BAC] CH211-245B3 (1) (order this), DKEY-264E9 (1) (order this)
    pcnt Encodes: [EST] cb754 (1) (order this), fc85c01
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_001346290 (1)
    Genomic GenBank:BX936453 (1) 93361 bp
    Select Tool
    Polypeptide UniProtKB:I3ISP1 (1) 4245 aa
    Sequence Clusters UniGene:162224 (1)
    Sequence Information (all 17)
    ORTHOLOGY for pcnt ( Chr: 6 )
    CITATIONS (20)