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General Information
ZIRC
ZFIN ID: ZDB-GENE-030721-3
Gene Name: interferon phi 1
Gene Symbol: ifnphi1
Sequence Ontology ID : SO:0000704

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Previous Names: ifn1, ifn, ifnab (1)

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(Including Attributions)
Location: Chr: 3 Mapping Details/Browsers
Nomenclature History
AUTOMATED DESCRIPTION
Predicted to have cytokine activity and cytokine receptor binding activity. Involved in several processes, including defense response to other organism; regulation of defense response to virus by  ...
GENE EXPRESSION
All Expression Data: 46 figures from 26 publications
Directly Submitted Expression Data: 1 figure (1 image) from Thisse et al., 2005 [eu784]
Wild-type Stages, Structures: Cleavage:2-cell (0.75h-1.0h) to Adult (90d-730d, breeding adult)
 
Curated Microarray Expression: GEO (1)
MUTATIONS AND SEQUENCE TARGETING REAGENTS
Allele Type Localization Consequence Mutagen Suppliers
hu7894 Point Mutation Unknown Premature Stop ENU
  • Zebrafish International Resource Center (ZIRC) (order this)
  • la023992Tg Transgenic Insertion Unknown Unknown DNA
    Targeting reagents:
    PHENOTYPE No data available
    DISEASE ASSOCIATED WITH ifnphi1 HUMAN ORTHOLOG No data available
    DISEASE ASSOCIATED WITH ifnphi1 VIA EXPERIMENTAL MODELS No data available
    GENE ONTOLOGY
    Ontology GO Term
    Biological Process defense response to bacterium (more)
    Cellular Component extracellular region (more)
    Molecular Function cytokine activity (more)
    GO Terms (all 21)
    PROTEIN FAMILIES, DOMAINS AND SITES
  • InterPro:IPR000471 (1)
  • InterPro:IPR009079 (1)
  • InterPro:IPR015588 (1)
  • Pfam:PF00143 (1)
  • TRANSCRIPTS
    Type Name Length (bp) Analysis
    mRNA ifnphi1-201 (1) 736
    ifnphi1-202 (1) 612
    GENE PRODUCT DESCRIPTION
    INTERACTIONS AND PATHWAYS
    ANTIBODIESNo data available
    PLASMIDSNo data available
    CONSTRUCTS WITH SEQUENCES FROM ifnphi1
    MARKER RELATIONSHIPS
    ifnphi1Contained in: [BAC] DKEY-104G4 (1) (order this), DKEY-248K5 (1) (order this)
    ifnphi1Encodes: [EST] eu784 (1)
    [cDNA] MGC:193611 (1) (order this)
    SEQUENCE INFORMATION
    Type Accession # Length (bp/aa) Analysis
    RNA RefSeq:NM_207640 (1) 694bp
    Genomic GenBank:BX005440 (1) 166695bp
    Select Tool
    Polypeptide UniProtKB:Q76KA5 (1) 196aa
    Sequence Clusters UniGene:85981 (1)
    Sequence Information (all 35)
    ORTHOLOGY for ifnphi1 (Chr: 3)
    CITATIONS (153)